PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154840.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 375aa MW: 42512.4 Da PI: 5.4814

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.5	1e-11	90	120	3	33
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 ++k++rr+++NReAAr+sR+RKka+i++Le XP_019154840.1 90 ADKAQRRLAQNREAARKSRLRKKAYIQQLEM 120 589**************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MVSYEAMNMK MSSPVTQFGP AGRMGIYEQF HQMSVWEDTL RSDIIPCSGD CMVTQADDKS 60 EYMSNESVVP SGSGDNQGDN QAHQAGKGIA DKAQRRLAQN REAARKSRLR KKAYIQQLEM 120 SRLKLAQLEL EIEKTRHQGV YMLGPTTKMG MYGTINPGIV AFEMEYAHWV EEQQKKISEL 180 RSILLSNTSS DVELQLVIEN VLNHYYELFR MRAEVAKADV FYLLSGMWRT SLERFFLWIG 240 GFRPSELINA VMPQLEPLAD EQLFNVCSLR DCCQQAEEAL TQGMDKLQQS LAQSMASMST 300 DAVIYGSQMS SAMEKLESIE SFVNQADNLR KQTLQQMSSI LTTHQAARGL LAFGEYFQRL 360 HALSSLWAAR PREMD

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MVSYEAMNMK MSSPVTQFGP AGRMGIYEQF HQMSVWEDTL RSDIIPCSGD CMVTQADDKS  60
EYMSNESVVP SGSGDNQGDN QAHQAGKGIA DKAQRRLAQN REAARKSRLR KKAYIQQLEM  120
SRLKLAQLEL EIEKTRHQGV YMLGPTTKMG MYGTINPGIV AFEMEYAHWV EEQQKKISEL  180
RSILLSNTSS DVELQLVIEN VLNHYYELFR MRAEVAKADV FYLLSGMWRT SLERFFLWIG  240
GFRPSELINA VMPQLEPLAD EQLFNVCSLR DCCQQAEEAL TQGMDKLQQS LAQSMASMST  300
DAVIYGSQMS SAMEKLESIE SFVNQADNLR KQTLQQMSSI LTTHQAARGL LAFGEYFQRL  360
HALSSLWAAR PREMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-132	bZIP family protein