PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154755.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 795aa MW: 89180.2 Da PI: 6.6899

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.1e-17	84	132	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r++lg+f a eAa a+++a+ +++g XP_019154755.1 84 YRGVRQRT-WGKWVAEIREP---N-RgSRIWLGTFTNALEAALAYDEAAIAMYG 132 9**999.******8...3.35*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MMDACDQVSN GVSSVVDCPE KKRSKKKGDI SKNVAEVLAK WKEHNAKVDS MADGQTTSRK 60 IAAKGSKKGC MKGKGGPENH RVNYRGVRQR TWGKWVAEIR EPNRGSRIWL GTFTNALEAA 120 LAYDEAAIAM YGTRARLNLP NYSLSRQSLK KSSSSLTELD SRSASSPSEA TTVVQCSDKG 180 SSSNLGYCDE SQDVTATGED ANNEGHVSED LRMTAEDQVE YNDKLDIVIS EDKLTNEVPS 240 NESRGLLMED KGINQQLDIF SGTYKAAIAQ DEAAKRLHGP CVQLLPNCKL GMKSWTRSSL 300 GSSGSDLTTS NHAEVSTAGN TKKQTSWNDA VTVCLQCGDE GFSNSLIHCV QCQHVAIHRY 360 CLDNLPNPVE KFVHWLCEDC KAHVPCQFTS QKSGPSMMGK HYAIEKHSNS TPAAALNRKR 420 LCNLIAESEK CICKDNLLRS DKTCTKVNLG QAEAMESASS PLGMKLKNVE QAISTQSEEW 480 RTQNSSSHQQ ETHESELTSM DNGSVLTPNE EKCHWVDKSN DVHKQSQLFL ARVEDCKQAN 540 YSSCQTYLEM DPSQREDTKL TCGFWPSEKS TPLLMVKEHG NFRQPTVAHE ETDSVELALS 600 IGDCSFMNKE MKKTSVCKDK PDQEKNPEEI LLLSCESNLK TKTFTIPEWH GQSQPVTVPI 660 WRGSFNILHN KYDKFDGFVA HLSSKACKKV HDEAHWFQQI IDFKMFLKSD LLPKTFAIEE 720 PSDDNIGLYF FPESTRYERV FDYLVDEMMR QGLALSAFMK NAELLVFTSM ELQPHYRRFH 780 GKHYLWGVFR EKQDS

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MMDACDQVSN GVSSVVDCPE KKRSKKKGDI SKNVAEVLAK WKEHNAKVDS MADGQTTSRK  60
IAAKGSKKGC MKGKGGPENH RVNYRGVRQR TWGKWVAEIR EPNRGSRIWL GTFTNALEAA  120
LAYDEAAIAM YGTRARLNLP NYSLSRQSLK KSSSSLTELD SRSASSPSEA TTVVQCSDKG  180
SSSNLGYCDE SQDVTATGED ANNEGHVSED LRMTAEDQVE YNDKLDIVIS EDKLTNEVPS  240
NESRGLLMED KGINQQLDIF SGTYKAAIAQ DEAAKRLHGP CVQLLPNCKL GMKSWTRSSL  300
GSSGSDLTTS NHAEVSTAGN TKKQTSWNDA VTVCLQCGDE GFSNSLIHCV QCQHVAIHRY  360
CLDNLPNPVE KFVHWLCEDC KAHVPCQFTS QKSGPSMMGK HYAIEKHSNS TPAAALNRKR  420
LCNLIAESEK CICKDNLLRS DKTCTKVNLG QAEAMESASS PLGMKLKNVE QAISTQSEEW  480
RTQNSSSHQQ ETHESELTSM DNGSVLTPNE EKCHWVDKSN DVHKQSQLFL ARVEDCKQAN  540
YSSCQTYLEM DPSQREDTKL TCGFWPSEKS TPLLMVKEHG NFRQPTVAHE ETDSVELALS  600
IGDCSFMNKE MKKTSVCKDK PDQEKNPEEI LLLSCESNLK TKTFTIPEWH GQSQPVTVPI  660
WRGSFNILHN KYDKFDGFVA HLSSKACKKV HDEAHWFQQI IDFKMFLKSD LLPKTFAIEE  720
PSDDNIGLYF FPESTRYERV FDYLVDEMMR QGLALSAFMK NAELLVFTSM ELQPHYRRFH  780
GKHYLWGVFR EKQDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	1e-26	ERF family protein