PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154446.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 280aa    MW: 30368.8 Da    PI: 6.2615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.5e-11161208455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_019154446.1 161 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 208
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDPPIINEAS FSAANPAAYS LAEIWPFTTA GNGGASGGHV GGGLGLRMCS FPGLAEAAAN  60
SVDESTVTEQ SGSRGNVAGE RKRRGVNSGD ESSKFVSAND LNECSDKRMK ASESKDENGG  120
LKVEAESSSR TVNKRTEHSN KPEPPKDYIH VRARRGQATD SHSLAERARR EKISERMKIL  180
QDLVPGCNKV IGKALVLDEI INYIQSLQCQ VEFLSMKLEA VNSRMNPTLE AYSQKDLAPA  240
GFDAPGMLLN TQPPREYTQE THPSEWLHMQ VGSSSFERVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-80bHLH family protein