PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019154366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 362aa MW: 39990.9 Da PI: 6.2947 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.2 | 3.4e-09 | 208 | 255 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a++L + +++++ Lq XP_019154366.1 208 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQFLQ 255 8*************************9....89999*************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MESMELGQTR SVNCGAKPGD IRTELPQFGN EGFHSLMPVV SEEAGSSFTA LLGLPAKQAV 60 ELLVHSSEAE DSPATKLPEI EPQRNYHHQG FLPPPIFPSD TALVDRASKF SVFAGNSPET 120 ESIPSNSCSK PPHFVKSEPA DSDSNPNSSP AVSNPTVNQK SAKRKEREKK IKEPSKKSKK 180 AANNTSEGDG EKLPYVHVRA RRGQATDSHS LAERARREKI NARMKLLQEL VPGCNKISGT 240 AMVLDEIINH VQFLQRQVEF LSMRLAAVNP RIDFNIDALF AAETDSPVEN NCTGMIMPSM 300 WPEGQAIENR PQHQQLWHAD GFHQPMWTRE ENCSFIAPEN SLLTYDSTNS GPLLANQLKM 360 EI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57800.2 | 2e-75 | bHLH family protein |