PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154226.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 347aa MW: 37992.1 Da PI: 7.1575

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.2e-40	54	114	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s XP_019154226.1 54 HDQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 114 6899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGLTSLQVCM DSSVDWLQGT IDDEGGMDSS SSPSGVDILT CSRPLIERRL RPPHDQALKC 60 PRCESTHTKF CYYNNYSLSQ PRYFCKTCRR YWTKGGTLRN IPVGGGCRKN KKVSSSSSSS 120 SSANKKSSSS PNDHHHQFPH PHPPPPPHYH HHQNLGQSSS CTSSPGSSIN PTDLHLSFPA 180 EMQFSHHQFT NFHLAPTGFL GIESPTPIDF MEGNAGFVMG GTTPPSRNQD FLGNNNGDFG 240 MMAQTTFPTS TTTLCPQFGM PIDGNTVGPT LMLPYDHHHH HHHGDDQFNA AMHHQDVKPN 300 PKLLSLEWHN DQGCSDAGKD SFGYLNGVGS WTGLMNGYGS SATNPLV

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGLTSLQVCM DSSVDWLQGT IDDEGGMDSS SSPSGVDILT CSRPLIERRL RPPHDQALKC  60
PRCESTHTKF CYYNNYSLSQ PRYFCKTCRR YWTKGGTLRN IPVGGGCRKN KKVSSSSSSS  120
SSANKKSSSS PNDHHHQFPH PHPPPPPHYH HHQNLGQSSS CTSSPGSSIN PTDLHLSFPA  180
EMQFSHHQFT NFHLAPTGFL GIESPTPIDF MEGNAGFVMG GTTPPSRNQD FLGNNNGDFG  240
MMAQTTFPTS TTTLCPQFGM PIDGNTVGPT LMLPYDHHHH HHHGDDQFNA AMHHQDVKPN  300
PKLLSLEWHN DQGCSDAGKD SFGYLNGVGS WTGLMNGYGS SATNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	4e-48	Dof family protein