PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154171.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 301aa    MW: 33315.4 Da    PI: 9.5236
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.99.6e-30151205358
       CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     p+YVNaKQy++Il+RR+ Rakle+e+k+  k rk ylheSRh hAl+R+RgsgGrF
  XP_019154171.1 151 PIYVNAKQYRAILRRREIRAKLEAENKV-VKVRKAYLHESRHVHALKRARGSGGRF 205
                     9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLNFSFSKKE DTGQKSAPQR GFHMKQTESQ LQDQDNTSTL STGQSDHTVA AMTPSNCHMP  60
KVGPQPGYAE IHERQMKDCS IKPSQPHLDE DCTIHQGQLD FSQSMGCLSW TEPYLGRLVA  120
TYGPNGIIYP QMVGIVPARM PLPSECAESI PIYVNAKQYR AILRRREIRA KLEAENKVVK  180
VRKAYLHESR HVHALKRARG SGGRFLNKNE LQQLKSAASP THGKTNTSNQ KGGGDISAGS  240
QLQHSESGSW GTSSSTPSGS DVTSIFSGDG IFQQPEFRVS RSPYHMGVSM HEAENFVRRR  300
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.17e-43NF-YA family protein