PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154170.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 335aa    MW: 36811 Da    PI: 8.9263
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.61.1e-29185239358
       CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     p+YVNaKQy++Il+RR+ Rakle+e+k+  k rk ylheSRh hAl+R+RgsgGrF
  XP_019154170.1 185 PIYVNAKQYRAILRRREIRAKLEAENKV-VKVRKAYLHESRHVHALKRARGSGGRF 239
                     9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MLNFSFSKKE GDQTAAQSFT PMSITSSSLW NSTDQPENPL SGSADTGQKS APQRGFHMKQ  60
TESQLQDQDN TSTLSTGQSD HTVAAMTPSN CHMPKVGPQP GYAEIHERQM KDCSIKPSQP  120
HLDEDCTIHQ GQLDFSQSMG CLSWTEPYLG RLVATYGPNG IIYPQMVGIV PARMPLPSEC  180
AESIPIYVNA KQYRAILRRR EIRAKLEAEN KVVKVRKAYL HESRHVHALK RARGSGGRFL  240
NKNELQQLKS AASPTHGKTN TSNQKGGGDI SAGSQLQHSE SGSWGTSSST PSGSDVTSIF  300
SGDGIFQQPE FRVSRSPYHM GVSMHEAENF VRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.15e-43NF-YA family protein