PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154102.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 304aa    MW: 34192.6 Da    PI: 6.1167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH292e-09140187455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +      K   Ka iL + ++Y++sLq
  XP_019154102.1 140 THSLAERVRREKISERMKILQGLVPGC-----DKvSGKALILDEIINYVQSLQ 187
                     8*************************9.....45388***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MSDCFFEGPN SFSEFCELES LISNSNSHSR HPSPSPSVTN IISSSSSSFT KYSLVGEEMM  60
MMPTPMEKKR KSRKASSIAQ SKGVKESDKG KRKRERMNNN GDEEKELESS EKMEEKKGVE  120
EEAPVGYIHV RARRGQATDT HSLAERVRRE KISERMKILQ GLVPGCDKVS GKALILDEII  180
NYVQSLQNQV EFLSMKLASE NPMFYDGGLD ILHAPPADNI NMEQEQWNPT MRGSIEIGAV  240
MSEAKSDLTL MPTIQSIANS DYQFQFIATP TSSLLYQHPH FLNPINQGNG QLLWDMGDQR  300
PKIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-46bHLH family protein