PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154100.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 317aa    MW: 35675.9 Da    PI: 6.1167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-09153200455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +      K   Ka iL + ++Y++sLq
  XP_019154100.1 153 THSLAERVRREKISERMKILQGLVPGC-----DKvSGKALILDEIINYVQSLQ 200
                     8*************************9.....45388***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSDCFFEGPN SFSEFCELES LISNSNSHSR HPSPSPSVTN IISSSSSSFT KYSLVGEEMM  60
MMPTPMEKKR KSRKASSIAQ SKGVKESDKG KRKRERMNNN NNNNNNNNNN NNNGDEEKEL  120
ESSEKMEEKK GVEEEAPVGY IHVRARRGQA TDTHSLAERV RREKISERMK ILQGLVPGCD  180
KVSGKALILD EIINYVQSLQ NQVEFLSMKL ASENPMFYDG GLDILHAPPA DNINMEQEQW  240
NPTMRGSIEI GAVMSEAKSD LTLMPTIQSI ANSDYQFQFI ATPTSSLLYQ HPHFLNPINQ  300
GNGQLLWDMG DQRPKIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-45bHLH family protein