PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153972.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

STAT

Protein Properties

Length: 704aa MW: 78869.8 Da PI: 6.7301

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	183.7	2.4e-57	222	342	1	121
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 ldv+ll+alg+p+ k++ev asL++ads ++vek+ d eapLL+sydG+ef s+drp+kl++GrasfklkisqLsskcdnrLfrikf i+k +y XP_019153972.1 222 LDVMLLDALGKPAYKELEVFASLVFADSEAPVEKPLDGEAPLLTSYDGLEFDSSDRPSKLIQGRASFKLKISQLSSKCDNRLFRIKFGIQKTGRY 316 8******************************************************************************************** PP STAT 96 pfleavskpirCisrsrntrsssltk 121 pflea+s pirCisrsr++rsss+t XP_019153972.1 317 PFLEALSIPIRCISRSRTSRSSSVTR 342 *******************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MGMDEVGSYG LLKDLKLEFE DRVQNGGITL CFWLYLNNPT ALPSTILHQE HPDIASNAPF 60 LLLDEQSRIM LFPLICLHQE ASRPSNAICS KQIPCASNKN EFPVKKWVHI ACEISQVILR 120 LHIDGEIVGE RPLTSSLNND LHSDVSKKVS LCSIRGNDDG LQGYVHGVEL FHQDSSIRSH 180 YLKDSPLQLS IDSSSAYEID EYNDGVWSIV GGKASCRKNF SLDVMLLDAL GKPAYKELEV 240 FASLVFADSE APVEKPLDGE APLLTSYDGL EFDSSDRPSK LIQGRASFKL KISQLSSKCD 300 NRLFRIKFGI QKTGRYPFLE ALSIPIRCIS RSRTSRSSSV TRKKSPSSIH LDGGLPEVLH 360 NIVHEAKQSP SSKRVKLGQE KSLAVFKDDC ILKEADEESK SHMWTTNEGN NNAYKTGAVG 420 RPESRDGAEN FSSDSENSEA TNSVPGNFSP HKGPISDLII FKYCLGGVSE RCLLLKEIAM 480 TYKEEALGSF AEQVSLFSGC AHHRRQILIS KRLIEDGIKC WSFISRNSHN VLWDNLVTGL 540 QDHFMKLTFC TTRSLTRQDF EILRRIAGCQ EMVSQENFEK MWCWLYPVAF TLSQKQMNSL 600 WSSLSPKWME GFITKEEAES SLLGPGGVQA PGTFILRFPM SRSWPHPDAG TLVVTYVGSD 660 YTIHHRLLSH ESVYCSKEMT GKPLQEMLLE EPELSRLGRT LRGQ

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MGMDEVGSYG LLKDLKLEFE DRVQNGGITL CFWLYLNNPT ALPSTILHQE HPDIASNAPF  60
LLLDEQSRIM LFPLICLHQE ASRPSNAICS KQIPCASNKN EFPVKKWVHI ACEISQVILR  120
LHIDGEIVGE RPLTSSLNND LHSDVSKKVS LCSIRGNDDG LQGYVHGVEL FHQDSSIRSH  180
YLKDSPLQLS IDSSSAYEID EYNDGVWSIV GGKASCRKNF SLDVMLLDAL GKPAYKELEV  240
FASLVFADSE APVEKPLDGE APLLTSYDGL EFDSSDRPSK LIQGRASFKL KISQLSSKCD  300
NRLFRIKFGI QKTGRYPFLE ALSIPIRCIS RSRTSRSSSV TRKKSPSSIH LDGGLPEVLH  360
NIVHEAKQSP SSKRVKLGQE KSLAVFKDDC ILKEADEESK SHMWTTNEGN NNAYKTGAVG  420
RPESRDGAEN FSSDSENSEA TNSVPGNFSP HKGPISDLII FKYCLGGVSE RCLLLKEIAM  480
TYKEEALGSF AEQVSLFSGC AHHRRQILIS KRLIEDGIKC WSFISRNSHN VLWDNLVTGL  540
QDHFMKLTFC TTRSLTRQDF EILRRIAGCQ EMVSQENFEK MWCWLYPVAF TLSQKQMNSL  600
WSSLSPKWME GFITKEEAES SLLGPGGVQA PGTFILRFPM SRSWPHPDAG TLVVTYVGSD  660
YTIHHRLLSH ESVYCSKEMT GKPLQEMLLE EPELSRLGRT LRGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein