PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019153855.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 305aa    MW: 34201.8 Da    PI: 5.6366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019153855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.98.8e-17120170256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++  grWvAeIr p +   r+r +lg+f++ae+Aa a+++ + +l+g+
  XP_019153855.1 120 LYRGVRQRH-LGRWVAEIRLPHN---RARLWLGTFDSAEDAALAYDREAYRLRGA 170
                     59******9.8*********732...4*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MNPTTEGVRI SVEEQDHDLS DRPLKKMKNI PQLLSSSTSH PTHKPLISPP QPPSFRFPFA  60
LHDTIPHPLF HHQTMISFAP QQQLQSSSGC GNDQISWQSA GPIGLGHDGL NEAASPLPKL  120
YRGVRQRHLG RWVAEIRLPH NRARLWLGTF DSAEDAALAY DREAYRLRGA KARLNFPHLF  180
LDGALHEDLE TATQKEAKPK QITSGNIIES NNTKCSGISA HEPKTIDDDY VNHDRDVEPE  240
WAGDELESDW LPGSNNNTFW DHNISTTTDT FLQQSDFAIS SFPDDNLPHL STTEAGILQQ  300
EPYLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.14e-31ERF family protein