PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153420.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 434aa MW: 46080.9 Da PI: 8.387

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	62.5	9.4e-20	213	262	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g XP_019153420.1 213 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 262 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MCLSIKVANR KDSGGYARFP ATGSGEEEAS ASASASAVEE GPSESFDEMI RREIQQEADY 60 LLSAAAAPPP MFSGYGQSGE MSAVVTALTQ VMSSQRSPGE QWRFGGAAAA PSLGGVYSVN 120 SPSSTYSSTS SSSGAGQKRR REQEESVTQL PEHVQRVYGG FGDFRTPAET TSSSVKSEEG 180 AGIVGPPPAT VGAATSEVGT ASVDQETGER RRRYRGVRQR PWGKWAAEIR DPHKAARVWL 240 GTFETAEAAA RAYDEAALRF RGNRAKLNFP ENVRLMPPPP QPRPQQAAAT RMHAAVSGAA 300 QLPVIAPPRP PLMLQSQPHA AVQGGGSGVS GDYWEYSQLL QNPGELLSQQ PRSLLEQMYY 360 ASSMAVLHSH SMPSSSAASA SPSSSSSFPL LFSAAQPSTQ SSFFRPPSTQ SPPTSSNFRP 420 PFWTSSAHYP PSSS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MCLSIKVANR KDSGGYARFP ATGSGEEEAS ASASASAVEE GPSESFDEMI RREIQQEADY  60
LLSAAAAPPP MFSGYGQSGE MSAVVTALTQ VMSSQRSPGE QWRFGGAAAA PSLGGVYSVN  120
SPSSTYSSTS SSSGAGQKRR REQEESVTQL PEHVQRVYGG FGDFRTPAET TSSSVKSEEG  180
AGIVGPPPAT VGAATSEVGT ASVDQETGER RRRYRGVRQR PWGKWAAEIR DPHKAARVWL  240
GTFETAEAAA RAYDEAALRF RGNRAKLNFP ENVRLMPPPP QPRPQQAAAT RMHAAVSGAA  300
QLPVIAPPRP PLMLQSQPHA AVQGGGSGVS GDYWEYSQLL QNPGELLSQQ PRSLLEQMYY  360
ASSMAVLHSH SMPSSSAASA SPSSSSSFPL LFSAAQPSTQ SSFFRPPSTQ SPPTSSNFRP  420
PFWTSSAHYP PSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	214	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	5e-21	ERF family protein