PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019153403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 268aa MW: 29288.2 Da PI: 8.3474 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.8e-14 | 108 | 152 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G+g+W+ I+r k+Rt+ q+ s+ qky XP_019153403.1 108 PWTEEEHKLFLLGLQKVGKGNWRGISRNYVKTRTPTQVASHAQKY 152 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGSLRMVADC GFSCVSNGLQ DSRTCDELSS ASAGVESSGE IMLFGVRVRV DPMRKSVSLN 60 NLSQYEHLNS ATTDNESMKA VVDDGYASAD DDVPHRSSGG RDRKRGVPWT EEEHKLFLLG 120 LQKVGKGNWR GISRNYVKTR TPTQVASHAQ KYFLRRTNLN RRRRRSSLFD ITTHAVSPEE 180 GNLVPPPLTV APVLLPLQIE RPMENLVQVN NTSAILVHPL PVVSLPCSPS QLLDPSSLSL 240 KLSMSLDHSS SMHLVFPGIN GDTVVGVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74840.2 | 3e-51 | MYB_related family protein |