PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153004.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 375aa MW: 41536.7 Da PI: 6.6694

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.9	9.3e-08	60	116	1	57
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 eke +r rr NRe+Ar +R++a eeL++k++ L eN+ Lkk + k+e++ XP_019153004.1 60 EKEARRLRRVLANRESARQTIRRRQAMYEELTKKAADLALENENLKKVTSVVKEEAQ 116 799*******************************************99999998877 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEAE 60 KEARRLRRVL ANRESARQTI RRRQAMYEEL TKKAADLALE NENLKKVTSV VKEEAQDIYE 120 VSNSTQPEMS TAPSFFYNHS PMMPCIWRPM FQPLDAIHLQ HGSQNGFSSN VGEPTPFLKQ 180 EHSTSNPATP FYVLPFPWLL PFHAPSPYFP QSSDHNETSV LHQCSVSSSI TPVSGVSMEQ 240 HRVFLPVKDE TEDSNYTQAI QKDDCKEVGL GFLSGLGTNC TTEGIRQHLE PRPKQTAALM 300 AGTKVSSLGG EVCDLNTISS STLSQITRDS FEDKGVLTCP SKNSAEATAA IEARKRRKEI 360 MKLKNHLHCR PCHMH

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEAE  60
KEARRLRRVL ANRESARQTI RRRQAMYEEL TKKAADLALE NENLKKVTSV VKEEAQDIYE  120
VSNSTQPEMS TAPSFFYNHS PMMPCIWRPM FQPLDAIHLQ HGSQNGFSSN VGEPTPFLKQ  180
EHSTSNPATP FYVLPFPWLL PFHAPSPYFP QSSDHNETSV LHQCSVSSSI TPVSGVSMEQ  240
HRVFLPVKDE TEDSNYTQAI QKDDCKEVGL GFLSGLGTNC TTEGIRQHLE PRPKQTAALM  300
AGTKVSSLGG EVCDLNTISS STLSQITRDS FEDKGVLTCP SKNSAEATAA IEARKRRKEI  360
MKLKNHLHCR PCHMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	354	359	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-24	bZIP family protein