PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152986.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 427aa MW: 47317.1 Da PI: 6.3615

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.6	1.1e-07	112	168	1	57
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 eke +r rr NRe+Ar +R++a eeL++k++ L eN+ Lkk + k+e++ XP_019152986.1 112 EKEARRLRRVLANRESARQTIRRRQAMYEELTKKAADLALENENLKKVTSVVKEEAQ 168 799*******************************************99999998877 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEQD 60 HEILSPRHNI ENPLPNILGS GNEFEICPSL TCSFDYPSVI GSKSRQNITE AEKEARRLRR 120 VLANRESARQ TIRRRQAMYE ELTKKAADLA LENENLKKVT SVVKEEAQDI YEVSNSTQPE 180 MSTAPSFFYN HSPMMPCIWR PMFQPLDAIH LQHGSQNGFS SNVGEPTPFL KQEHSTSNPA 240 TPFYVLPFPW LLPFHAPSPY FPQSSDHNET SVLHQCSVSS SITPVSGVSM EQHRVFLPVK 300 DETEDSNYTQ AIQKDDCKEV GLGFLSGLGT NCTTEGIRQH LEPRPKQTAA LMAGTKVSSL 360 GGEVCDLNTI SSSTLSQITR DSFEDKGVLT CPSKNSAEAT AAIEARKRRK EIMKLKNHLH 420 CRPCHMH

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAYRTTTCRQ YDDGMVDCEL EAAEALAGLA HSALSTASDA SESPANSRSP PPPPPPHEQD  60
HEILSPRHNI ENPLPNILGS GNEFEICPSL TCSFDYPSVI GSKSRQNITE AEKEARRLRR  120
VLANRESARQ TIRRRQAMYE ELTKKAADLA LENENLKKVT SVVKEEAQDI YEVSNSTQPE  180
MSTAPSFFYN HSPMMPCIWR PMFQPLDAIH LQHGSQNGFS SNVGEPTPFL KQEHSTSNPA  240
TPFYVLPFPW LLPFHAPSPY FPQSSDHNET SVLHQCSVSS SITPVSGVSM EQHRVFLPVK  300
DETEDSNYTQ AIQKDDCKEV GLGFLSGLGT NCTTEGIRQH LEPRPKQTAA LMAGTKVSSL  360
GGEVCDLNTI SSSTLSQITR DSFEDKGVLT CPSKNSAEAT AAIEARKRRK EIMKLKNHLH  420
CRPCHMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	406	411	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-27	bZIP family protein