PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152845.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 374aa MW: 41976.6 Da PI: 6.2625

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.7	4.5e-12	86	122	3	39
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 ++k++rr+++NReAAr+sR+RKka++++Le+ +L+ XP_019152845.1 86 ADKVQRRLAQNREAARKSRLRKKAYVQQLETSRLKLT 122 68****************************8666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MVSYQAMNMS SATTQFAPTR AMAAMYEPFH QMSGWEETLR GDIIPAVSAC VVPQATAGID 60 DKSEYTSSDS AAPSASGDNQ PTQGVADKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLK 120 LTQLELELQK ARQQGLHSFG ATRNIALCGT INPGIASFEM EYTQWVEEQQ KKNSELRNGL 180 QSHVHDMELQ LLVDSFLGHY SDLFRMKADV AKADIFYLIS GMWVSPIERF FLWLGGFRPS 240 ELISVITPQI EPLTDQQLLN VYNLQLCCQQ AEDALTQGMD KLQQSLGQSM KLINSSAGGA 300 GSFNTQMVSA MEKLESLESF INQADHLREQ TLQQMCRILT TRQAARGLLA FGEYFQRLRA 360 LSSIWAARPY ETYD

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MVSYQAMNMS SATTQFAPTR AMAAMYEPFH QMSGWEETLR GDIIPAVSAC VVPQATAGID  60
DKSEYTSSDS AAPSASGDNQ PTQGVADKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLK  120
LTQLELELQK ARQQGLHSFG ATRNIALCGT INPGIASFEM EYTQWVEEQQ KKNSELRNGL  180
QSHVHDMELQ LLVDSFLGHY SDLFRMKADV AKADIFYLIS GMWVSPIERF FLWLGGFRPS  240
ELISVITPQI EPLTDQQLLN VYNLQLCCQQ AEDALTQGMD KLQQSLGQSM KLINSSAGGA  300
GSFNTQMVSA MEKLESLESF INQADHLREQ TLQQMCRILT TRQAARGLLA FGEYFQRLRA  360
LSSIWAARPY ETYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-134	bZIP family protein