PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 348aa MW: 39629.2 Da PI: 9.5451 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.2 | 2.6e-17 | 34 | 113 | 13 | 98 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +l +p kf+++ +k + l+ +sg W+v l + ++++ ++++GWkeFv+++ L+e+D ++Fk++g s+f v +f+ XP_019152838.1 34 NEQLAVPQKFVNNLREK--LAGCVALKGPSGAIWNVGL--TACGEKLYFQRGWKEFVEEHSLQENDLLIFKYNGGSQF--DVVMFD 113 56799******665544..4446***************..********************************998998..666665 PP | |||||||
2 | B3 | 34.6 | 3.4e-11 | 232 | 324 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 f+ ++ p +v k l++p + a ++ +e++++ltl+ + + W+ ++ +rk s ++G ++Fv +n+L+e D++vF+l +r ++ + v XP_019152838.1 232 FVVIMAPGNVYKGFFLSIPTDWAGKYLPTTEKNFDLTLRV-KENAWTTRCYHRKIS-----GSGYRKFVLENNLEEFDVCVFRLASRsDDIVFDV 320 67788889999999************77778999999887.889******555555.....78*********************98867777777 PP EEE- CS B3 95 kvfr 98 ++fr XP_019152838.1 321 SIFR 324 7776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MGDDCRGCQK WEEHIYWSRF QAVQFFQILS GCYNEQLAVP QKFVNNLREK LAGCVALKGP 60 SGAIWNVGLT ACGEKLYFQR GWKEFVEEHS LQENDLLIFK YNGGSQFDVV MFDQQSYCEK 120 EASYFIRKCG HQELPSRGKA NGNPTPVTPL TPETNSESSV EVIRATTKRK KPREAQTSVK 180 QGTRGKRGAR KGSMSRIRSA EIQLKSNRRP VTEEEKANAI QMASAVASCY GFVVIMAPGN 240 VYKGFFLSIP TDWAGKYLPT TEKNFDLTLR VKENAWTTRC YHRKISGSGY RKFVLENNLE 300 EFDVCVFRLA SRSDDIVFDV SIFRVVEEVV PPSRVTQAVP SRCYKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 2e-59 | B3 family protein |