PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 28280.7 Da PI: 6.7847 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.9 | 7.8e-18 | 37 | 113 | 15 | 97 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +l +p kfa++ +k ++l+ +sg W+v l + +++ +l+ GWkeFv+++ L+e+D++vFk++g+ +f v++f XP_019152837.1 37 QLAIPQKFADNLREK--LADSVSLKGPSGAIWNVDL--EAEGDKLYLKYGWKEFVEEHSLRENDVLVFKYNGNLQF--DVTMF 113 578******666655..5557***************..********************************997666..66665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGDSDCGGCK KREENIYWSH FQTVQFFQIL CGHYDLQLAI PQKFADNLRE KLADSVSLKG 60 PSGAIWNVDL EAEGDKLYLK YGWKEFVEEH SLRENDVLVF KYNGNLQFDV TMFDGLTLCE 120 KEASYFIRHC EHRELTIRAI PISATPNSYH ETAANESSSH EEFEVTARKN PGNGFASINQ 180 STQAYGRPRK RPKSRNGGPS HVYPLQLKSN RRPVTEDEKG KAIQAASAAA VGDSFTVVMQ 240 ECHVYKGFFL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 194 | PRKRPKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 6e-41 | B3 family protein |