PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152792.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 198aa    MW: 22267.5 Da    PI: 9.188
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.3e-121466155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    rr+ h  +E+rRR+++ + +e Lr+llP       ++K s ++  +  v YIk+L+
  XP_019152792.1 14 RRALHRDVEKRRRNQMANLYESLRSLLPLqY---IKGKRSASDHMQASVSYIKELE 66
                    7999*************************66...*******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MKLQSGDGYD DSCRRALHRD VEKRRRNQMA NLYESLRSLL PLQYIKGKRS ASDHMQASVS  60
YIKELEKKVE GLHKQKMMMK TSSNMVAVVE KSVEENEAKS AKWCWANDTS VAVNKCEDGV  120
EILMNTRRAA ATGGGGVAYP LSKLLETLLR QGLNVVNCCY SHQEDRSLLR IQSQVNGWSD  180
VDVAALQQKV VDVVIKPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-28bHLH family protein