PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152756.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 391aa MW: 43899.5 Da PI: 7.0569

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	304	342	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 lF+ ++yp+ +e+ LA+++gL+++qV++WF N R + XP_019152756.1 304 LFQHflHPYPNDSEKLILASQTGLSKNQVSNWFINARVR 342 5775569******************************88 PP
2	BELL	89.3	3.9e-29	171	236	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +el++k+ kL+++leeV++rY+qy++q++ ++ssFea+ g k+Yt+lAl a+S+hF +L+dai+ qi XP_019152756.1 171 NELEAKIMKLITMLEEVERRYEQYCHQMEELVSSFEAISG----KSYTALALEAMSKHFCSLRDAIIAQI 236 699*********************************87....79********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MVTQDSPSNP TQPSCNLQQL GTQNYDNVFP PDLPNNNTQF LGGRMQPRST GSRHFMDLLG 60 ASNDVHNQPQ KLSLSLFPPS VQCRETSLNQ NIMNNNPGFM NYSLAGSSAL AAPIADSKYL 120 RPALELLEEV ASVGGQDPEV RYEKLMRRLS RNSKNGSLGV RSAVRIDFPT NELEAKIMKL 180 ITMLEEVERR YEQYCHQMEE LVSSFEAISG KSYTALALEA MSKHFCSLRD AIIAQINATR 240 RRLSEETPTT GLHSHFSLFH PSSEAARLQK LSLQHLGLIQ SSRQTWRPIR GLPETSVAIL 300 RAWLFQHFLH PYPNDSEKLI LASQTGLSKN QVSNWFINAR VRLWKPMIEE MYKEEFAAES 360 SSADECDNLF GGSSTRSSRT TTQGPMNSAE E

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MVTQDSPSNP TQPSCNLQQL GTQNYDNVFP PDLPNNNTQF LGGRMQPRST GSRHFMDLLG  60
ASNDVHNQPQ KLSLSLFPPS VQCRETSLNQ NIMNNNPGFM NYSLAGSSAL AAPIADSKYL  120
RPALELLEEV ASVGGQDPEV RYEKLMRRLS RNSKNGSLGV RSAVRIDFPT NELEAKIMKL  180
ITMLEEVERR YEQYCHQMEE LVSSFEAISG KSYTALALEA MSKHFCSLRD AIIAQINATR  240
RRLSEETPTT GLHSHFSLFH PSSEAARLQK LSLQHLGLIQ SSRQTWRPIR GLPETSVAIL  300
RAWLFQHFLH PYPNDSEKLI LASQTGLSKN QVSNWFINAR VRLWKPMIEE MYKEEFAAES  360
SSADECDNLF GGSSTRSSRT TTQGPMNSAE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	2e-81	TALE family protein