PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152676.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 322aa    MW: 34678.2 Da    PI: 5.1771
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.31e-16140186455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  XP_019152676.1 140 VHNLSEKRRRSRINEKLKALQTLIPNS-----NKTDKASMLDEAIEYLKQLQ 186
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MADPYGTGHH SLEPEDMSSF LQNLLHGAST SADGDDGGVL FPRPAMEATD FMGRMRDGAS  60
APAIEPSPSL NFSDPSLFYG AQVKESAVNA FSSAAIGDFD ATGSSKRIEF ENDNKGCETS  120
DALSNLAQPR PSKRSRSAEV HNLSEKRRRS RINEKLKALQ TLIPNSNKTD KASMLDEAIE  180
YLKQLQLQVQ MLTMRNGLNL YPGYFQGSLQ SVQLPSSGGE FDKGNAMLNT RGSAATFSGN  240
QEILAQTSSF QISNQNSTAH QTMENNTANS ENPIALGTSI QNHYGLLNQL ASTKDLCRDD  300
ALSRLHLETS CSGNNSSPGI SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-39bHLH family protein