PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152611.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 391aa MW: 41217.4 Da PI: 8.4197

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.3	3e-22	291	353	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ekelkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e++++k +++l +++ XP_019152611.1 291 EKELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEINRIKSDYEQLVAQN 353 89********************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGSSERDKSP KEAKEPKTPS SQEQATTTGT VNPEWPGFQA FSPVPPHGFL ASSPQAHPYM 60 WGVQHLMPPY GTPPHPYVAM YPHGSIYAHP SMPPGAYPFS PFPVPSPNGI AEASVNTSGN 120 VEVNSKASEG KEKLPIKRSK GSLGSLNMVT GKNNEPGKAS ANGVYSKSAE SASEGSSGGS 180 DANSQNESQT KSGGEAPQNG NAAHGSQNGE SNAHAMMNHT MAVLPITAGG TASGVPGPTT 240 NLNIGMDYWG SAASSAIHGI QGKVPSAPVA GGMVAAGSRE GVQPQLWVQN EKELKRQRRK 300 QSNRESARRS RLRKQAECDE LAQRAEALKE ENASLRSEIN RIKSDYEQLV AQNASLKEKL 360 GEAPGKDDPR PSRNEHLGTQ SSEAEPLQGG Q

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGSSERDKSP KEAKEPKTPS SQEQATTTGT VNPEWPGFQA FSPVPPHGFL ASSPQAHPYM  60
WGVQHLMPPY GTPPHPYVAM YPHGSIYAHP SMPPGAYPFS PFPVPSPNGI AEASVNTSGN  120
VEVNSKASEG KEKLPIKRSK GSLGSLNMVT GKNNEPGKAS ANGVYSKSAE SASEGSSGGS  180
DANSQNESQT KSGGEAPQNG NAAHGSQNGE SNAHAMMNHT MAVLPITAGG TASGVPGPTT  240
NLNIGMDYWG SAASSAIHGI QGKVPSAPVA GGMVAAGSRE GVQPQLWVQN EKELKRQRRK  300
QSNRESARRS RLRKQAECDE LAQRAEALKE ENASLRSEIN RIKSDYEQLV AQNASLKEKL  360
GEAPGKDDPR PSRNEHLGTQ SSEAEPLQGG Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	314	RRSRLRK
2	308	315	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-147	bZIP family protein