PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152610.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 394aa MW: 41571.9 Da PI: 8.4197

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.3	3e-22	294	356	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ekelkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e++++k +++l +++ XP_019152610.1 294 EKELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEINRIKSDYEQLVAQN 356 89********************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGSSERDKSP KEAKEPKTPS SQILQEQATT TGTVNPEWPG FQAFSPVPPH GFLASSPQAH 60 PYMWGVQHLM PPYGTPPHPY VAMYPHGSIY AHPSMPPGAY PFSPFPVPSP NGIAEASVNT 120 SGNVEVNSKA SEGKEKLPIK RSKGSLGSLN MVTGKNNEPG KASANGVYSK SAESASEGSS 180 GGSDANSQNE SQTKSGGEAP QNGNAAHGSQ NGESNAHAMM NHTMAVLPIT AGGTASGVPG 240 PTTNLNIGMD YWGSAASSAI HGIQGKVPSA PVAGGMVAAG SREGVQPQLW VQNEKELKRQ 300 RRKQSNRESA RRSRLRKQAE CDELAQRAEA LKEENASLRS EINRIKSDYE QLVAQNASLK 360 EKLGEAPGKD DPRPSRNEHL GTQSSEAEPL QGGQ

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGSSERDKSP KEAKEPKTPS SQILQEQATT TGTVNPEWPG FQAFSPVPPH GFLASSPQAH  60
PYMWGVQHLM PPYGTPPHPY VAMYPHGSIY AHPSMPPGAY PFSPFPVPSP NGIAEASVNT  120
SGNVEVNSKA SEGKEKLPIK RSKGSLGSLN MVTGKNNEPG KASANGVYSK SAESASEGSS  180
GGSDANSQNE SQTKSGGEAP QNGNAAHGSQ NGESNAHAMM NHTMAVLPIT AGGTASGVPG  240
PTTNLNIGMD YWGSAASSAI HGIQGKVPSA PVAGGMVAAG SREGVQPQLW VQNEKELKRQ  300
RRKQSNRESA RRSRLRKQAE CDELAQRAEA LKEENASLRS EINRIKSDYE QLVAQNASLK  360
EKLGEAPGKD DPRPSRNEHL GTQSSEAEPL QGGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	317	RRSRLRK
2	311	318	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-147	bZIP family protein