PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 23059 Da PI: 10.6336 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.6e-09 | 21 | 71 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksL 54 + +Er+RR +++ +L +l+P+ + +++ ls + L +Av YIk L XP_019152554.1 21 KTVERKRRIHMKYLCGKLVSLIPPhHFyPSKQESLSQQDQLDQAVTYIKTL 71 679*********************7775555556***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MEEKMRMISS RGGVSEKPDR KTVERKRRIH MKYLCGKLVS LIPPHHFYPS KQESLSQQDQ 60 LDQAVTYIKT LRERVEKLEK MKKKMSWGKE EESSEKKKKK KKKKKSATTA AAACTLLKSA 120 VIEVRDLEST LEVVLMSATN KPNFMLHQLI RIVEEEGAQL QTATFSTAGD KVFHTLHAQV 180 KVARLGMETS RVYGRLKQLI T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 104 | KKKMSWGKEEESSEKKKKKKKKK |
2 | 96 | 102 | KKKKKKK |
3 | 96 | 104 | KKKKKKKKK |
4 | 96 | 105 | KKKKKKKKKK |
5 | 97 | 103 | KKKKKKK |
6 | 97 | 105 | KKKKKKKKK |
7 | 98 | 104 | KKKKKKK |
8 | 99 | 105 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10586.1 | 3e-16 | bHLH family protein |