PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152449.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 208aa MW: 23431.8 Da PI: 9.9234 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.6 | 3.7e-22 | 30 | 117 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Yn YA++vGFsvrk +++++ +++i +++f C k g++++ ++ + ++ rtgC a ++ dg w vtk +eHnHel++ XP_019152449.1 30 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKQKPNSG--VKLYSKIDMRTGCGAFVQFDVGGDGMWTVTKHLKEHNHELCS 117 7****************************************99887..888999**********************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MVIICKLNVV IVDEDLVGVV VRNVDEAFEL YNGYAYRVGF SVRKGQQRYK ASTKSIQMKR 60 FFCAKAGYKQ KPNSGVKLYS KIDMRTGCGA FVQFDVGGDG MWTVTKHLKE HNHELCSFGK 120 SHLLRSHRRV GNNQLEYLKD MKSSGVALAD GMRFLKHQSG GSPLVGFTNR DAYNSMASVS 180 LKCLDGSDSN SLVEIFRRRQ SNEADFFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-20 | FAR1 family protein |