PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRF | ||||||||
Protein Properties | Length: 355aa MW: 39002.3 Da PI: 8.2706 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.4 | 7.1e-25 | 84 | 128 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_019152289.1 84 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 128 79****************************************986 PP | |||||||
2 | QLQ | 66.1 | 8.2e-23 | 23 | 58 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa Q+q+L++Q+++yKyL+a++PvPp+L+++i++ XP_019152289.1 23 PFTAVQWQELEHQAMIYKYLVAGVPVPPDLVVPIRR 58 9*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MSGTSTSVSG GAVGYGYGGF RPPFTAVQWQ ELEHQAMIYK YLVAGVPVPP DLVVPIRRSF 60 EALSSRFFHH PTLGYCSYYG KKFDPEPGRC RRTDGKKWRC SKDAYPDSKY CERHMHRGRN 120 RSRKPVESQS ASQPLSTAMS HITSGSSATS GSFQSTDRSF QNMPLYSIAN SEGLCYGSPA 180 TATKLQMECA SYGRDNKDFW YTHGMNPNAD EHNFPPETSA SVGSLGMGSN IDNAWPPVQF 240 QVSSTPMLKL KNESLLLGSS SSNVHLPGGV YEPIADATIP KQRQQHCLFG SDINSPGTVK 300 QEQQSMRPFF SEWPATKESW SNLDSDGSNK TQLSISIPVT TSDFSPRNAG SQNDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-50 | GRF family protein |