PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 19043.9 Da PI: 4.7663 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 9 | 57 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa+a++ a+ l+g XP_019152030.1 9 YVGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAAFHLRG 57 99***999.**********8...557***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MEGSTMGVYV GVRKRKWGKW VSEIREPGKK TRIWLGSFET PEMAAAAYDV AAFHLRGCKA 60 RLNFPELVEG FPKPASSQPE DVRLAAHQAA MGFKPPAEGV PGAGLRPVRI GLSPNQIQAI 120 NETPMDSPNK MWMELAATTL LLREPPLMIC EDMMELEDWE EIQDDSIWDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 5e-52 | ERF family protein |