PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152012.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 361aa MW: 41626.8 Da PI: 9.3701

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93	2.5e-29	28	82	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + H rFv+av+qLGG+ kAtPk+i++lm+++ +t +h+kSHLQkYRl XP_019152012.1 28 KPRFKWTVQVHGRFVDAVNQLGGIYKATPKNIMRLMDIEQITTDHIKSHLQKYRL 82 79****************************************************8 PP
2	Myb_DNA-binding	34.5	4.7e-11	32	81	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT + + ++vdav+qlGg t+k I+r m + t ++ks++qky+ XP_019152012.1 32 KWTVQVHGRFVDAVNQLGGIykaTPKNIMRLMDiEQITTDHIKSHLQKYR 81 799999**********88**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM 60 RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKTIRATV FQRHQEHKYS ITPGLHTMGI 120 QVSDVPEIST ERQRTSQTKL EQFERAQQQV QYIEREYHGT LKQTSNNEKR QYPQVEEMEL 180 TTEQLDEQRK MAQKDHISIL NSDPLSSPME STNYIEPDYV GTTYSTLEIE RKNFLKPSYK 240 RCLEAHKEKG KFPYTSARTD DRELIIPEKK RFDAAPLKIS LQMEKGSTSS GFSADETHER 300 GKCYQVYASP TSAAQIEAQN MVAVDNKINM SNFPSYKDLK AMNASNEKSF DLNMPAKEQE 360 E

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM  60
RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKTIRATV FQRHQEHKYS ITPGLHTMGI  120
QVSDVPEIST ERQRTSQTKL EQFERAQQQV QYIEREYHGT LKQTSNNEKR QYPQVEEMEL  180
TTEQLDEQRK MAQKDHISIL NSDPLSSPME STNYIEPDYV GTTYSTLEIE RKNFLKPSYK  240
RCLEAHKEKG KFPYTSARTD DRELIIPEKK RFDAAPLKIS LQMEKGSTSS GFSADETHER  300
GKCYQVYASP TSAAQIEAQN MVAVDNKINM SNFPSYKDLK AMNASNEKSF DLNMPAKEQE  360
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	4e-24	G2-like family protein