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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019152007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 402aa MW: 46473.3 Da PI: 9.3276 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.7 | 2.9e-29 | 28 | 82 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + H rFv+av+qLGG+ kAtPk+i++lm+++ +t +h+kSHLQkYRl XP_019152007.1 28 KPRFKWTVQVHGRFVDAVNQLGGIYKATPKNIMRLMDIEQITTDHIKSHLQKYRL 82 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 34.3 | 5.5e-11 | 32 | 81 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT + + ++vdav+qlGg t+k I+r m + t ++ks++qky+ XP_019152007.1 32 KWTVQVHGRFVDAVNQLGGIykaTPKNIMRLMDiEQITTDHIKSHLQKYR 81 799999************88**************99*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MMSTPGRNET KNEKNGQEVK QSLSGVRKPR FKWTVQVHGR FVDAVNQLGG IYKATPKNIM 60 RLMDIEQITT DHIKSHLQKY RLNGSKQANT NTRKSKKCFH EFSGELFKLL NSKHEEHSTY 120 KALYNIILNF RTMETAIRAT VFQRHQEHKY SITPGLHTMG SIQVSDVPEI STERQRTSQT 180 KLEFERAQQQ VQYIEREYHG TLKQTSNNEK RQYPQVEEME LTTEQLDEQR KMAQKDHISI 240 LNSDPLSSPM ESTNYIEPDY VGTTYSTLEI ERKNFLKPSY KRCLEAHKEK GKFPYTSART 300 DDRELIIPEK KRFDAAPLKI SLQMEKGSTS SGFSADETHE RGKCYQVYAS PTSAAQIEAQ 360 NMVAVDNKIN MSNFPSYKDL KAMNASNEKS FDLNMPAKEQ EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18240.2 | 7e-20 | G2-like family protein |