PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 325aa MW: 36232.1 Da PI: 5.9539 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.1e-16 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ll d++++ G g+W+t +++ g+ R++k+c++rw +yl XP_019151890.1 34 RGPWTPAEDKLLTDYINKEGEGQWRTLPKMAGLLRCGKSCRLRWMNYL 81 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.4e-15 | 87 | 132 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg T++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l XP_019151890.1 87 RGHITPDEEDLILRLHGLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132 6778******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MRTQSSEKGA AAGEAPSKAK GKRTPCCSKV GLKRGPWTPA EDKLLTDYIN KEGEGQWRTL 60 PKMAGLLRCG KSCRLRWMNY LRPTVKRGHI TPDEEDLILR LHGLLGNRWS LIAGRIPGRT 120 DNEIKNYWNT HLSKKLISQG IDPRNHKPLP VNPTNSNHPK NHTPSSSSVP IIKPTPIHVG 180 LSNQDKNVKM NSSTTVNVVG GTTNLQNDQI DQPNSVGGTT ENHQPTGNGD EEFNMDLGDD 240 NEDNVGMDFC PDEDVFSTFF DSLMNEDVFF AAQNNQQPNH HDITPLPSTS ENNNNNNQPL 300 NPFQHMNFPF STEGWVDDDD DDFLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-77 | MYB family protein |