PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151807.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 277aa    MW: 29738.2 Da    PI: 6.5248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-13212257655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  XP_019151807.1 212 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKFLQ 257
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MQPESGAGGG GSEPSRGAGL TRFRSAPATW LEALLDSDTE NDVVLDPPPI LPSSSKPPPH  60
PHSQPLPTPP AQLKQASVGG SGSRYAADLG LFESGGGGGE AASGLSNFVR QNSSPAEFLS  120
QISSDIFFPS FGAPPSYDYL SSPMDVAQSA KRPREADSQS PSAKLSSPLK GEQSGRLRSA  180
GGSLDAEMEK MMEDLVPCRV RAKRGCATHP RSIAERVRRT RISDRIRKLQ ELVPNMDKQT  240
NTADMLEEAV EYVKFLQKQI QELTEHQKKC TCSTTEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09180.15e-60bHLH family protein