PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | Trihelix | ||||||||
Protein Properties | Length: 270aa MW: 29973.8 Da PI: 9.8458 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 45.1 | 2.6e-14 | 20 | 103 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Liea ++ +l+rg+l++++W+ev++++ r+ g+ +r+ +qCk++ + l+k+yk +k ++ s +p++++l+ XP_019151554.1 20 CWSEGATETLIEAWGDRYIKLNRGNLRQKDWKEVADAVnsRQDGVkpQRTDIQCKNRVDTLKKKYKLEKSKSSP------SIWPFYHRLD 103 7*************************************9977777668******************99887775......57*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MEAPVAQSKP RPHAGGREDC WSEGATETLI EAWGDRYIKL NRGNLRQKDW KEVADAVNSR 60 QDGVKPQRTD IQCKNRVDTL KKKYKLEKSK SSPSIWPFYH RLDFLVGTTS ATPPPPPRKS 120 TTITLTVKPG SSPNNAKPTA LVYSGGSSKP NSSGSNNSSL GGGAGDDDLL FTGPGKKRKL 180 DYVDLSEETT AYKELARAIL RFGEIYERIE SSKQQQIMEL EKQRMEFSKD LEVQRMNMFM 240 EAQLQLEKSK RTAKHSPAPV AGNEAVGEAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11100.1 | 2e-64 | Trihelix family protein |