PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019151411.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CPP

Protein Properties

Length: 569aa MW: 61739.1 Da PI: 7.9846

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019151411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46	1.1e-14	147	185	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ + XP_019151411.1 147 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCHNNVD 185 89************************.******986 PP
2	TCR	51	2.9e-16	231	270	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_019151411.1 231 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 270 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEKSEGGDFL RKQAQVEVAS TAAAPPMEAD FPTKKLARQL DFTVTSGGDG EGGGNASAAV 60 SPDNSQRIVP HAVKATQPHL TVKEGQPPRS QLPPQPHSQS QQHLLLMPMQ QPSAQSPHPS 120 IRPLKPESPR VRPRQSASEI KDGTPKKQKQ CNCKHSRCLK LYCECFASGI YCDGCNCVNC 180 HNNVDNEAAR REAVEATLER NPNAFRPKIA SSPHGVRDSK EETGDGIILG KHNKGCHCKK 240 SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSEERQALFR GDHANNIAYL QQAANAAITG 300 AIGTSGYGSP PVAKKRKGQE LYFGPTMKIP VHALGQFPQV INGFFYFLLS QLVLMPSDEN 360 DARAKQAEEH RETSTTSSQE RLGVSKDSLG KDLPGYSSSE NCVEKASSDE PDVDGTHMSE 420 GRPVSPGTLA LMCDEQETVF AAASQSPDEI NLGSNMSSQL RRGRSMTEAY AKQENIVLTK 480 FRDCLNRLIT FGEIKESRCS SMARASESDY RKGIINNAST VTETQNQKEP YSNGKSVVPS 540 PSRTSQVVTS ANSGSVNSSR PKGPSPGEH

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEKSEGGDFL RKQAQVEVAS TAAAPPMEAD FPTKKLARQL DFTVTSGGDG EGGGNASAAV  60
SPDNSQRIVP HAVKATQPHL TVKEGQPPRS QLPPQPHSQS QQHLLLMPMQ QPSAQSPHPS  120
IRPLKPESPR VRPRQSASEI KDGTPKKQKQ CNCKHSRCLK LYCECFASGI YCDGCNCVNC  180
HNNVDNEAAR REAVEATLER NPNAFRPKIA SSPHGVRDSK EETGDGIILG KHNKGCHCKK  240
SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSEERQALFR GDHANNIAYL QQAANAAITG  300
AIGTSGYGSP PVAKKRKGQE LYFGPTMKIP VHALGQFPQV INGFFYFLLS QLVLMPSDEN  360
DARAKQAEEH RETSTTSSQE RLGVSKDSLG KDLPGYSSSE NCVEKASSDE PDVDGTHMSE  420
GRPVSPGTLA LMCDEQETVF AAASQSPDEI NLGSNMSSQL RRGRSMTEAY AKQENIVLTK  480
FRDCLNRLIT FGEIKESRCS SMARASESDY RKGIINNAST VTETQNQKEP YSNGKSVVPS  540
PSRTSQVVTS ANSGSVNSSR PKGPSPGEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein