PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019151409.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CPP

Protein Properties

Length: 617aa MW: 66544.4 Da PI: 8.0336

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019151409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.8	1.2e-14	147	185	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ + XP_019151409.1 147 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCHNNVD 185 89************************.******986 PP
2	TCR	50.8	3.2e-16	231	270	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_019151409.1 231 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 270 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEKSEGGDFL RKQAQVEVAS TAAAPPMEAD FPTKKLARQL DFTVTSGGDG EGGGNASAAV 60 SPDNSQRIVP HAVKATQPHL TVKEGQPPRS QLPPQPHSQS QQHLLLMPMQ QPSAQSPHPS 120 IRPLKPESPR VRPRQSASEI KDGTPKKQKQ CNCKHSRCLK LYCECFASGI YCDGCNCVNC 180 HNNVDNEAAR REAVEATLER NPNAFRPKIA SSPHGVRDSK EETGDGIILG KHNKGCHCKK 240 SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSEERQALFR GDHANNIAYL QQAANAAITG 300 AIGTSGYGSP PVAKKRKGQE LYFGPTMKIP VHALGQFPQS NHIKASVQPA SVASIPSSHA 360 GNAAALGPSK FTYRSLMADI IQPQDVMDVC SFLVSCSREA AKMLSDENDA RAKQAEEHRE 420 TSTTSSQERL GVSKDSLGKD LPGYSSSENC VEKASSDEPD VDGTHMSEGR PVSPGTLALM 480 CDEQETVFAA ASQSPDEINL GSNMSSQLRR GRSMTEAYAK QENIVLTKFR DCLNRLITFG 540 EIKESRCSSM ARASESDYRK GIINNASTVT ETQNQKEPYS NGKSVVPSPS RTSQVVTSAN 600 SGSVNSSRPK GPSPGEH

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEKSEGGDFL RKQAQVEVAS TAAAPPMEAD FPTKKLARQL DFTVTSGGDG EGGGNASAAV  60
SPDNSQRIVP HAVKATQPHL TVKEGQPPRS QLPPQPHSQS QQHLLLMPMQ QPSAQSPHPS  120
IRPLKPESPR VRPRQSASEI KDGTPKKQKQ CNCKHSRCLK LYCECFASGI YCDGCNCVNC  180
HNNVDNEAAR REAVEATLER NPNAFRPKIA SSPHGVRDSK EETGDGIILG KHNKGCHCKK  240
SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSEERQALFR GDHANNIAYL QQAANAAITG  300
AIGTSGYGSP PVAKKRKGQE LYFGPTMKIP VHALGQFPQS NHIKASVQPA SVASIPSSHA  360
GNAAALGPSK FTYRSLMADI IQPQDVMDVC SFLVSCSREA AKMLSDENDA RAKQAEEHRE  420
TSTTSSQERL GVSKDSLGKD LPGYSSSENC VEKASSDEPD VDGTHMSEGR PVSPGTLALM  480
CDEQETVFAA ASQSPDEINL GSNMSSQLRR GRSMTEAYAK QENIVLTKFR DCLNRLITFG  540
EIKESRCSSM ARASESDYRK GIINNASTVT ETQNQKEPYS NGKSVVPSPS RTSQVVTSAN  600
SGSVNSSRPK GPSPGEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-151	CPP family protein