PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151212.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 356aa    MW: 39932.3 Da    PI: 4.9829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.4e-30129189259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+++eitY+geH+++
  XP_019151212.1 129 EDGYSWRKYGQKDILGAKYPRSYYRCTYRamqNCWATKQVQRSDEDPTTFEITYKGEHTCS 189
                     7**************************99999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDAALGWEFK ALINELTQGV ECTKRLRASF NSETCFETQN SLLQQIVASY EKSLMILNCG  60
LGTQSQQVPP LSSAPESSIS VDGSPRSDDM NKGSKEQEYR DMSKKRKLMP TWTKQVKVGT  120
DNGLEGPPED GYSWRKYGQK DILGAKYPRS YYRCTYRAMQ NCWATKQVQR SDEDPTTFEI  180
TYKGEHTCSQ APKSVPPQAS PKKQDLKQSI HCNDSLSMQP NQMLMELRSN LRVNTSDLER  240
KETAYPFSFP ASFSGLTDEK PMFQISQVDD NLLGTYSPSF VSPSPTTPES NYFSVSHQQT  300
SSFGGVQNLH HSESDLTDIF SANTSSTNSP IVGLEYTLDP ADFDPNFPFD TSQFFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.17e-71WRKY family protein