PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151161.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 400aa    MW: 43633.3 Da    PI: 5.5838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-1992142155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r  r +lg+fg+a eAa a+++a+++++g
  XP_019151161.1  92 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFGSAIEAALAYDEAARAMYG 142
                     56*****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MSLENTGRDQ EMAVIQQTPN MPSLPVDYSR KRKSRSRRNG TKNVAETLAK WKEYNERLDS  60
VDGMGKPARK VPAKGSKKGC MKGKGGPENG HCNYRGVRQR TWGKWVAEIR EPNRGSRLWL  120
GTFGSAIEAA LAYDEAARAM YGPCARLNLP NYTSSKESCS SMLPNSTSSG DSSAESTSPP  180
TTSASESTTA SSLSNVYPAN KTKVEHDAYK IKHEDGRSES GIDGTRPPFQ YTGTPVSSMK  240
EEPKRELLDP NKIQTAPDDR AKEEATSINH QVEAAKDFLD NFTWDEMFDV EELLGALDTT  300
PPNAPGTFAN IGQGGQAAYS YSQSPNLSSQ LLKPDARSLG NLQPMEQYAS AGAGNGLDFL  360
KPGRQEDNGL DFLKPGRQED LNFSLDDLAF LELDSQLGGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-33ERF family protein