PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019151027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 310aa MW: 33215.6 Da PI: 7.4931 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5.2e-18 | 60 | 109 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aa+a+++a+ l+g XP_019151027.1 60 KYRGVRQRS-WGKWVAEIREPKK---RTRRWLGTFATAEDAARAYDRAAIVLYG 109 7*****999.**********965...5999******************988776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MATHEINPNI HNSIITQPPT TSNVSGDNLD CNAAAASGES GGGKRGGGKG RGGPDNSKFK 60 YRGVRQRSWG KWVAEIREPK KRTRRWLGTF ATAEDAARAY DRAAIVLYGS KAQLNLQPSG 120 NSDDGSSSSS QSSKRATSYS TQNLRPILPK PPGFGLVPPP SAAAATAYIP YGFQYPPEIL 180 QQYSLQLPQP PQPPFRSSEA IVLCNSIPSP NPNPTPPPNP NHPESDPKTQ SQQQDDFSFY 240 DEMNSLVGSV GSSLSLSSTM AAAPPAFGSP GSPMFWPTGE DGLAGSSIWD YPNVDQYQLF 300 DFNQDNLGKI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 41 | 48 | GGGKRGGG |
2 | 42 | 49 | GGGKRGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 2e-24 | ERF family protein |