PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019150919.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 275aa MW: 31083.9 Da PI: 6.2688

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019150919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.6e-16	179	241	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++lkre+rkq NRe+ArrsR+RK+ae ee + ++L + N Lk+e+++lk+ ++kl+ e+ XP_019150919.1 179 ERQLKREKRKQANRESARRSRLRKQAEYEEVVRSYDSLNKDNVNLKSEMNKLKEDMEKLRLEN 241 799********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGKDEENNSP KCDLGSQPAQ QFPVPSSYLS TSLPTGHVPQ IHMWPPQQPF MPPYGMPYPM 60 MYPQGIVYAH PAVTLAAVTS SVELVPKPSE AIDQNSAKRL KWHNGLAVPI TNDNFEVNAE 120 GSVHGTSQSD DIATSTDESN EGMEDPKTVK EQPSLNRTPE ICFARNAVRF PIEVSVQDER 180 QLKREKRKQA NRESARRSRL RKQAEYEEVV RSYDSLNKDN VNLKSEMNKL KEDMEKLRLE 240 NATLMEKLES TQPRQPEEAV PNDPKAKHED SCKKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	202	RRSRLRK
2	196	203	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	2e-32	bZIP family protein