PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150909.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 282aa    MW: 31468.3 Da    PI: 7.405
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1898148256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++++ae Aa a++ a+ kl+ge
  XP_019150909.1  98 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSAEAAAYAYDTAAYKLRGE 148
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MPEIHEDNNA QIRSSLSQLI LKSGSNNTLD SIFSHCHQEP NPNPYPVSQP LGSSVYLRQR  60
DLLQKFCEEN RTNPQTCSSL PFKNFLYENP AAGGKKKLYR GVRQRHWGKW VAEIRLPQNR  120
MRVWLGTYDS AEAAAYAYDT AAYKLRGEYA RLNFPDPTSL GFGDNAKLNA VKTAVDAKIQ  180
AIRQKVRREK AKKKEAKKSG NESVMAVESS SCSFAGNESW STAELISPSV SEDGFWMSDT  240
SPSSVSGELA AAVAEQTSEM EDCFLARMPS FDPELIWEVL AN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187195RREKAKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.17e-57ERF family protein