PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019150906.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 439aa MW: 48382.3 Da PI: 6.649

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019150906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.9e-32	81	134	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_019150906.1 81 PRLRWTPDLHLCFVHAVETLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 134 8****************************************************7 PP
2	Myb_DNA-binding	49.8	7.9e-16	82	133	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av+ lGg t+k++ + m+ kg++ ++ks++q+y+ XP_019150906.1 82 RLRWTPDLHLCFVHAVETLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 133 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MKGGISCSPE ELSKKSPETQ IEEDLKEEEE EEEDDEEEEG ISEKGKGNNG SSSSNSTVEE 60 DGKKAGNSSG SVRQYVRSKT PRLRWTPDLH LCFVHAVETL GGQDRATPKL VLQLMNIKGL 120 SIAHVKSHLQ MYRSKKMDDL NQAVTSSNGR LLLDNGDHHH IFNFGHLQRL QGFNQTTNPT 180 VRFQDALRSH HQANAIYNPY INGGASSMIR HGLHGPAGER IFGGNIYGSH NNNNNVNSNH 240 HSHNNPLSSD YFRTAAAISR QSAAACKNME NEKLHQPHFF PAQRVLGSHQ FGSSPANQIL 300 LKKLQLDRGR DPPAVAPPPQ TTRNILEECV GVFRPDGADH CPAAAAAAAE ETYTLKRKSL 360 PDSSCDHQVN LDLSLSLRTR NENDQKRLKL DEEDAGEYDV GGVDTTDLSL SLFSSSSEKH 420 HGTTKQPTRI ENSGLHLSL

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MKGGISCSPE ELSKKSPETQ IEEDLKEEEE EEEDDEEEEG ISEKGKGNNG SSSSNSTVEE  60
DGKKAGNSSG SVRQYVRSKT PRLRWTPDLH LCFVHAVETL GGQDRATPKL VLQLMNIKGL  120
SIAHVKSHLQ MYRSKKMDDL NQAVTSSNGR LLLDNGDHHH IFNFGHLQRL QGFNQTTNPT  180
VRFQDALRSH HQANAIYNPY INGGASSMIR HGLHGPAGER IFGGNIYGSH NNNNNVNSNH  240
HSHNNPLSSD YFRTAAAISR QSAAACKNME NEKLHQPHFF PAQRVLGSHQ FGSSPANQIL  300
LKKLQLDRGR DPPAVAPPPQ TTRNILEECV GVFRPDGADH CPAAAAAAAE ETYTLKRKSL  360
PDSSCDHQVN LDLSLSLRTR NENDQKRLKL DEEDAGEYDV GGVDTTDLSL SLFSSSSEKH  420
HGTTKQPTRI ENSGLHLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-38	G2-like family protein