PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150897.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 334aa    MW: 37001.9 Da    PI: 4.5602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-20118168155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     + +r++lg+f taeeAa  +++a+ +++g
  XP_019150897.1 118 TKFRGVRQRP-WGKWAAEIRDPL----SrRRVWLGTFNTAEEAAMVYDNAAIQMRG 168
                     69********.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEEEGMLSTR VKYSEHKRQT TTVRHLPETN AGLPRVVRIS VTDSDATDSS GDEEGEGGLF  60
WRRRVKKYVN EVTFEAWGRD DGNASCNGVV RSGPTAAKRR KKAETPAVGN SGKVENVTKF  120
RGVRQRPWGK WAAEIRDPLS RRRVWLGTFN TAEEAAMVYD NAAIQMRGPD ALTNFSAPTA  180
AAAVKAPPEE RKPPKSVDSG YNSGEESHNN QRSPKSVLFF NEEPETESFL PPLPNDAVEM  240
SQDFSDYTSV PENFPDFSPF DPLFSNDLFK FDNPVPVPEV FDVTGFSDKI FEEECCGMFI  300
GSSHDTGFGL SALPADDYFL DYGDIFGSDP LVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.15e-43ERF family protein