PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019150896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 334aa MW: 37001.9 Da PI: 4.5602 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.8e-20 | 118 | 168 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdp + +r++lg+f taeeAa +++a+ +++g XP_019150896.1 118 TKFRGVRQRP-WGKWAAEIRDPL----SrRRVWLGTFNTAEEAAMVYDNAAIQMRG 168 69********.**********84....34*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MEEEGMLSTR VKYSEHKRQT TTVRHLPETN AGLPRVVRIS VTDSDATDSS GDEEGEGGLF 60 WRRRVKKYVN EVTFEAWGRD DGNASCNGVV RSGPTAAKRR KKAETPAVGN SGKVENVTKF 120 RGVRQRPWGK WAAEIRDPLS RRRVWLGTFN TAEEAAMVYD NAAIQMRGPD ALTNFSAPTA 180 AAAVKAPPEE RKPPKSVDSG YNSGEESHNN QRSPKSVLFF NEEPETESFL PPLPNDAVEM 240 SQDFSDYTSV PENFPDFSPF DPLFSNDLFK FDNPVPVPEV FDVTGFSDKI FEEECCGMFI 300 GSSHDTGFGL SALPADDYFL DYGDIFGSDP LVAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 5e-43 | ERF family protein |