PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019150881.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 327aa MW: 34905 Da PI: 9.2451

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019150881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.7e-39	72	131	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss XP_019150881.1 72 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 131 6789*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MVFSSVPVYL DPPNWPNQHG DGVDGSEGSP LLGAAMVAQG QAQPQPPAAA GGGIRPGSMT 60 ERARQAKIPF PEAALKCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV 120 GGGCRRNKRS SKGRSRSKSP GRADAPPSSS SNAHRRPGDI IASPGHHFPP PPQIPFLPPL 180 QNLTGFAAAT PDLGLNFSAN EMEFPAGNNS GINLSARFAD LFRLQQGITQ LPFLSGLDHP 240 ADGMYQFETG IDQYVAGATD HLGAKPFETG GGAANLLNVK LEEHNNNNAL NLSRNFLGMS 300 GNDQFWSGNN GFAADLPGYA SSTGRLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-39	Dof family protein