PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150805.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 373aa    MW: 40446.8 Da    PI: 6.8255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.00052342721255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_019150805.1 234 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 272
                     6677889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MNRGVLQSHG WWSINTSMRP PTSHHQQAGA NSSSSSPFMA APPPPPTTFF PHFTPPPLPF  60
SSSSSSSSSS WSDTHHPLPP SDSWSQLLLG GLVDEEDKSG LTANMEAAKK LENWEEQLLG  120
GHGGPTTFDD TKHQESSCYN VYGPNAEFAV AKQPNNNNNN WSQSSSPTSC VTTLSCASNM  180
LDSCNNKIVM SDNATRHPPP DHSSECNSTG TTGGAPKKPR VQPSSTTQST FKVRKEKLGD  240
RITALHQLVS PFGKTDTASV LLEAIGYIRF LQSQIEALSL PYLGTATETM RHHQPPVVQG  300
ERNSLFPEDP GQLLNDNCMK RKGISHHQDL HDESKKDLRS RGLCLVPISC TLQVGNDNGA  360
DYWAPAAFGG GFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-86bHLH family protein