PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150703.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 96aa    MW: 10906.2 Da    PI: 9.3615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.4e-0823631454
                    HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    d+i +  ++L++l+P+ + + +s K s + +L+++++YI+ L
  XP_019150703.1 23 DQIADLVSKLQRLIPEiR-NRRSDKASASKVLQETCNYIRRL 63
                    6899999*********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSSRRSSSRS RQSSDGVSRI SEDQIADLVS KLQRLIPEIR NRRSDKASAS KVLQETCNYI  60
RRLHREVDDL SERLSELLES TDSDSAQAAI IRSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.16e-25bHLH family protein