PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019150676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 456aa MW: 50549.7 Da PI: 7.8844 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.6e-14 | 28 | 72 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++++G+++W+ Ia+++ +t qc+ rw++yl XP_019150676.1 28 SWSQEEDDILREQIRLHGTENWTIIASKFK-DKTTRQCRRRWFTYL 72 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 42.7 | 1.3e-13 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a + +G++ W+ Ia+ + gRt++ +k+r+ + XP_019150676.1 78 KGGWSPEEDVLLCEAQRIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 121 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence |
MQNMKKKVSN GNGNSNEASK PKERHIVSWS QEEDDILREQ IRLHGTENWT IIASKFKDKT 60 TRQCRRRWFT YLNSDFKKGG WSPEEDVLLC EAQRIFGNRW TEIAKVVSGR TDNAVKNRFT 120 TLCKKRAKNE ALAKENNNSF INLNNKRVIF PGAGSPFKKL RRSHISDLPE NCNSGEKSLV 180 TCNAVNQLQR SPFSVLPNVG SSLPTNQNVS IKDSPTNGTF LKKDDPKILA LMQQAELLSS 240 LALKVNSENS HQSLENAWKV LQDFLNQKED DVLKGRISEM DFKGLAEDLK NINVPSQSWR 300 QPALSEDSAG SSEYSSESTL LSHAPGDKKE QCEAEVSALH QDIESGLQST EIGDRTTINA 360 FSGGTPANAT CTEADILPTC DKVGANEEAA AEECSSPLHV TPLFRTLAAA IPSPKFSESE 420 RQFLLKTLGM DCTSPKSSIN NTSHPPSCKR VLLHSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.1 | 1e-138 | MYB family protein |