PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150158.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 317aa    MW: 34781.6 Da    PI: 4.6888
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1154.8e-36251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF ++sF++g+k ll++
  XP_019150158.1  25 FLTKTYQLVDDSSVDDLISWNEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFMNESFRRGEKGLLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_019150158.1 111 IQRRKI 116
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGPSPAEQTG ESTAGESQRS LPTPFLTKTY QLVDDSSVDD LISWNEDGSA FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFMNESF RRGEKGLLRD IQRRKISPAS  120
AAASTSMAVA ANAVTVAVPS AVITVSPANS GDEQVLSSNS SPAATAIAIR QAVLTAAPEI  180
LEENERLRKE NAQLYRELNR LRGLCHNIYN MMSNYAVNPP ESTSGLPDGR TLDFLPASQG  240
AAAEHETTAE DEAVKAEDDG TTPRLFGVSI GVKRFRESED VEGERQTQSQ PHGSDMKTEP  300
LDCGSADNGP WLDNRLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.16e-86HSF family protein