PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150127.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GeBP
Protein Properties Length: 339aa    MW: 37816.2 Da    PI: 5.6511
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573104.77.3e-33138230298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     lfqrlwse+Dei+lL G+i++++k++ +p+ d+daf++f++ks++f+vsk+q+ +K++r++kK+ ++  k     ++sfsk+h+qk++++s+k+W
  XP_019150127.1 138 LFQRLWSEDDEIALLEGMIEYTEKENGDPYTDLDAFHDFIRKSLHFTVSKTQVQNKMKRMRKKYINNAGK----GKKSFSKPHEQKTYQVSRKVW 228
                     79*******************999999*******************************************....5569***************** PP

          DUF573  97 gs 98 
                     g+
  XP_019150127.1 229 GK 230
                     95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAKNRSEPKK SVAAEEEESS TDNEGSESDS ESEPEKTQTQ MQMIKSPSEA ETKVTGASST  60
PAKIQATSSS SYETDSESDS ESESQKPAPI IEPTDDPRES KPRKSDADRE VTESKRQKLN  120
PEEISEIKAS ADESKKQLFQ RLWSEDDEIA LLEGMIEYTE KENGDPYTDL DAFHDFIRKS  180
LHFTVSKTQV QNKMKRMRKK YINNAGKGKK SFSKPHEQKT YQVSRKVWGK GDEKMEDSSQ  240
VTVVHALMAY NGSAKINKNS MKKAPVVEDA IETPVAAAAA SSGWKNSLSK NKGAIVIGEE  300
KRREIEKKRK AVVVAEINLF LTELELIQEQ VKATLGAMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-28GeBP family protein