PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG074300.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 276aa    MW: 30234.4 Da    PI: 6.5256
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG074300.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.9e-172569147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+eE++++++a k++G   W+ I +++g ++t+ q++s+ qk+
  TRIDC7BG074300.7 25 REKWTEEEHDKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 69
                      789*****************55.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MQPNEEGTGE HPVKPRKPYT ITKQREKWTE EEHDKFLEAL KLYGRSWRQI QEHIGTKTAV  60
QIRSHAQKFF SKVVREPGAK IEIEIPPPRP KRKPLHPYPR KRANSCNGAN PANGQSKLAP  120
ISSSSGSDQE NGSPMSVLSV MQSDAFGSSM SNPSSRSTSP ESSDEENNVL PMVNGGEGQQ  180
TGIDQSHKEA DQENKDTGTS EEDSSDEVQV TSVKLFGKTV VIPDPRKRCS LDTGSGNGEQ  240
ISEFSNKATS QAPLAVEIQA YAAPTSGWVL PYNSFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.14e-36MYB_related family protein