PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG074300.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 571aa MW: 62032 Da PI: 6.3909

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG074300.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	142	186	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ TRIDC7BG074300.2 142 REKWTEEEHDKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 186 789***************55.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
GGQAPFSRAA RFASFSFSLG RFLWVTVLRR PAPVVAEEGV FWELPGRSRR EPLLLFPAFA 60 VGRWCCLPPG SFDLGDGEAE ICNSGERLMA SMALAEERDA LDSSRLPISQ GLSVDVAMQP 120 NEEGTGEHPV KPRKPYTITK QREKWTEEEH DKFLEALKLY GRSWRQIQEH IGTKTAVQIR 180 SHAQKFFSKV VREPGAKIEI EIPPPRPKRK PLHPYPRKRA NSCNGANPAN GQSKLAPISS 240 SSGSDQENGS PMSVLSVMQS DAFGSSMSNP SSRSTSPESS DEENNVLPMV NGGEGQQTGI 300 DQSHKEADQE NKDTGTSEED SSDEVQVTSV KLFGKTVVIP DPRKRCSLDT GSGHENGEQT 360 SQSSNKGTSQ APLAVDIPTH TKGEQISQSS NKATSPAPLA VEVPTYTNGE QISEFSNKAT 420 SQAPLAVEIQ AYAAPTSGWV LPYNSFPVHF GESAEARIAR LHMWWPYYGF PMVHPSGPSA 480 VAHNGKATDE SEAVKSPPVE SSSDFDDNTQ ATASKQWKVP ESLGTAQAPP SVSNFQLKPS 540 TNSAFVRVKP IISSGDEPAR GFVPYKRCRV E

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

GGQAPFSRAA RFASFSFSLG RFLWVTVLRR PAPVVAEEGV FWELPGRSRR EPLLLFPAFA  60
VGRWCCLPPG SFDLGDGEAE ICNSGERLMA SMALAEERDA LDSSRLPISQ GLSVDVAMQP  120
NEEGTGEHPV KPRKPYTITK QREKWTEEEH DKFLEALKLY GRSWRQIQEH IGTKTAVQIR  180
SHAQKFFSKV VREPGAKIEI EIPPPRPKRK PLHPYPRKRA NSCNGANPAN GQSKLAPISS  240
SSGSDQENGS PMSVLSVMQS DAFGSSMSNP SSRSTSPESS DEENNVLPMV NGGEGQQTGI  300
DQSHKEADQE NKDTGTSEED SSDEVQVTSV KLFGKTVVIP DPRKRCSLDT GSGHENGEQT  360
SQSSNKGTSQ APLAVDIPTH TKGEQISQSS NKATSPAPLA VEVPTYTNGE QISEFSNKAT  420
SQAPLAVEIQ AYAAPTSGWV LPYNSFPVHF GESAEARIAR LHMWWPYYGF PMVHPSGPSA  480
VAHNGKATDE SEAVKSPPVE SSSDFDDNTQ ATASKQWKVP ESLGTAQAPP SVSNFQLKPS  540
TNSAFVRVKP IISSGDEPAR GFVPYKRCRV E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	5e-34	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG074300.2